dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00502
Location and strand information: 84122 - 86500 (-)
Family: 1.B.14.3.6
Protein type: TC
Protein description: Vitamin B12 transporter BtuB

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00503
Location and strand information: 86728 - 88677 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00504
Location and strand information: 88701 - 91790 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00505
Location and strand information: 92117 - 93514 (-)
Family: null
Protein type: null
Protein description: Arylsulfatase

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00506
Location and strand information: 93571 - 94992 (-)
Family: GH28
Protein type: CAZyme
Protein description: Exo-poly-alpha-D-galacturonosidase
Protein isoelectric point: 6.9586
Protein molecular weight: 52382.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00507
Location and strand information: 95079 - 96455 (-)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3811
Protein molecular weight: 49587.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00508
Location and strand information: 96592 - 97158 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00509
Location and strand information: 97125 - 98588 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00510
Location and strand information: 98603 - 101809 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00511
Location and strand information: 102297 - 102899 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00512
Location and strand information: 102935 - 104167 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00513
Location and strand information: 104195 - 105658 (-)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5335
Protein molecular weight: 53209.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00514
Location and strand information: 105879 - 107969 (-)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00515
Location and strand information: 107989 - 111252 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00516
Location and strand information: 111493 - 112419 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00517
Location and strand information: 112548 - 113846 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3755
Protein molecular weight: 49607.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00518
Location and strand information: 113917 - 114150 (-)
Family: null
Protein type: null
Protein description: Rhamnulose-1-phosphate aldolase

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00519
Location and strand information: 114147 - 114725 (-)
Family: null
Protein type: null
Protein description: Rhamnulose-1-phosphate aldolase

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00520
Location and strand information: 114900 - 115931 (-)
Family: 2.A.7.6.1
Protein type: TC
Protein description: L-rhamnose-proton symporter

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00521
Location and strand information: 116177 - 117427 (-)
Family: null
Protein type: null
Protein description: L-rhamnose isomerase

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00522
Location and strand information: 117492 - 118949 (-)
Family: null
Protein type: null
Protein description: L-Rhamnulokinase

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00523
Location and strand information: 119075 - 120613 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2755
Protein molecular weight: 56671.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00524
Location and strand information: 120645 - 122480 (-)
Family: PL11
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.483
Protein molecular weight: 68229.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00525
Location and strand information: 122496 - 125294 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4736
Protein molecular weight: 104726.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_2|CGC2
Gene ID: MGYG000002273_00526
Location and strand information: 125500 - 128031 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3428
Protein molecular weight: 96206.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002273_00506	GH28_e26\|3.2.1.-	pectin
MGYG000002273_00507	PL1_e64\|4.2.2.2	pectin
MGYG000002273_00513	PL1_e7
MGYG000002273_00517	GH105_e39
MGYG000002273_00523	GH28_e61
MGYG000002273_00524	PL11_e1
MGYG000002273_00525	GH106_e0\|3.2.1.174	pectin
MGYG000002273_00526	GH105_e12

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002273_00502	Vitamin B12 transporter BtuB	TC	84122	86500	-	1.B.14.3.6
MGYG000002273_00503	hypothetical protein	null	86728	88677	-	SusD-like_3\| SusD_RagB
MGYG000002273_00504	TonB-dependent receptor SusC	TC	88701	91790	-	1.B.14.6.1
MGYG000002273_00505	Arylsulfatase	null	92117	93514	-	Sulfatase
MGYG000002273_00506	Exo-poly-alpha-D-galacturonosidase	CAZyme	93571	94992	-	GH28
MGYG000002273_00507	hypothetical protein	CAZyme	95079	96455	-	PL1_2\| PL1
MGYG000002273_00508	hypothetical protein	null	96592	97158	-	No domain
MGYG000002273_00509	hypothetical protein	null	97125	98588	-	SusD-like_3\| SusD_RagB
MGYG000002273_00510	TonB-dependent receptor SusC	TC	98603	101809	-	1.B.14.6.1
MGYG000002273_00511	hypothetical protein	null	102297	102899	-	Fib_succ_major
MGYG000002273_00512	hypothetical protein	null	102935	104167	-	No domain
MGYG000002273_00513	hypothetical protein	CAZyme	104195	105658	-	PL1_2\| PL1
MGYG000002273_00514	hypothetical protein	TC	105879	107969	-	8.A.46.1.3
MGYG000002273_00515	TonB-dependent receptor SusC	TC	107989	111252	-	1.B.14.6.1
MGYG000002273_00516	HTH-type transcriptional activator RhaS	TF	111493	112419	-	HTH_AraC+HTH_AraC
MGYG000002273_00517	hypothetical protein	CAZyme	112548	113846	-	GH105
MGYG000002273_00518	Rhamnulose-1-phosphate aldolase	null	113917	114150	-	Aldolase_II
MGYG000002273_00519	Rhamnulose-1-phosphate aldolase	null	114147	114725	-	Aldolase_II
MGYG000002273_00520	L-rhamnose-proton symporter	TC	114900	115931	-	2.A.7.6.1
MGYG000002273_00521	L-rhamnose isomerase	null	116177	117427	-	RhaA
MGYG000002273_00522	L-Rhamnulokinase	null	117492	118949	-	FGGY_N\| FGGY_C
MGYG000002273_00523	hypothetical protein	CAZyme	119075	120613	-	GH28
MGYG000002273_00524	Rhamnogalacturonan endolyase YesW	CAZyme	120645	122480	-	PL11
MGYG000002273_00525	hypothetical protein	CAZyme	122496	125294	-	GH106
MGYG000002273_00526	hypothetical protein	CAZyme	125500	128031	-	GH105
Protein ID	Protein Name	Type	Start	End	Strand	Signature